Literature DB >> 10026231

Amplification methods to increase the sensitivity of in situ hybridization: play card(s).

E J Speel1, A H Hopman, P Komminoth.   

Abstract

In situ hybridization (ISH) has proved to be an invaluable molecular tool in research and diagnosis to visualize nucleic acids in their cellular environment. However, its applicability can be limited by its restricted detection sensitivity. During the past 10 years, several strategies have been developed to improve the threshold levels of nucleic acid detection in situ by amplification of either target nucleic acid sequences before ISH (e.g., in situ PCR) or the detection signals after the hybridization procedures. Here we outline the principles of tyramide signal amplification using the catalyzed reporter deposition (CARD) technique, present practical suggestions to efficiently enhance the sensitivity of ISH with CARD, and discuss some applications and possible future directions of in situ nucleic acid detection using such an amplification strategy.

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Year:  1999        PMID: 10026231     DOI: 10.1177/002215549904700302

Source DB:  PubMed          Journal:  J Histochem Cytochem        ISSN: 0022-1554            Impact factor:   2.479


  34 in total

1.  Avidin- or streptavidin-biotin as a highly sensitive method to stain total protein on membranes.

Authors:  K E Santora; S A Nelson; K A Lewis; W J LaRochelle
Journal:  Mol Biotechnol       Date:  2000-06       Impact factor: 2.695

2.  An evaluation of tyramide signal amplification and archived fixed and frozen tissue in microarray gene expression analysis.

Authors:  Stanislav L Karsten; Vivianna M D Van Deerlin; Chiara Sabatti; Lisa H Gill; Daniel H Geschwind
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

3.  An electrochemical detection scheme for identification of single nucleotide polymorphisms using hairpin-forming probes.

Authors:  Tony Jun Huang; Minghsun Liu; Linda D Knight; Wayne W Grody; Jeff F Miller; Chih-Ming Ho
Journal:  Nucleic Acids Res       Date:  2002-06-15       Impact factor: 16.971

4.  Identification and characterization of endoplasmic reticulum stress-induced apoptosis in vivo.

Authors:  Kezhong Zhang; Randal J Kaufman
Journal:  Methods Enzymol       Date:  2008       Impact factor: 1.600

5.  Mixl1 localizes to putative axial stem cell reservoirs and their posterior descendants in the mouse embryo.

Authors:  Adam D Wolfe; Karen M Downs
Journal:  Gene Expr Patterns       Date:  2014-03-12       Impact factor: 1.224

6.  Co-localization of multiple antigens and specific DNA. A novel method using methyl methacrylate-embedded semithin serial sections and catalyzed reporter deposition.

Authors:  M Mueller; K Wacker; W F Hickey; E B Ringelstein; R Kiefer
Journal:  Am J Pathol       Date:  2000-12       Impact factor: 4.307

7.  KSHV cell attachment sites revealed by ultra sensitive tyramide signal amplification (TSA) localize to membrane microdomains that are up-regulated on mitotic cells.

Authors:  H Jacques Garrigues; Yelena E Rubinchikova; Timothy M Rose
Journal:  Virology       Date:  2014-01-31       Impact factor: 3.616

8.  Combined whole-mount fluorescence in situ hybridization and antibody staining in zebrafish embryos and larvae.

Authors:  Jianbo He; Dashuang Mo; Jingying Chen; Lingfei Luo
Journal:  Nat Protoc       Date:  2020-09-09       Impact factor: 13.491

9.  Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria.

Authors:  Annelie Pernthaler; Jakob Pernthaler; Rudolf Amann
Journal:  Appl Environ Microbiol       Date:  2002-06       Impact factor: 4.792

10.  Regulation of cranial morphogenesis and cell fate at the neural crest-mesoderm boundary by engrailed 1.

Authors:  Ron A Deckelbaum; Greg Holmes; Zhicheng Zhao; Chunxiang Tong; Claudio Basilico; Cynthia A Loomis
Journal:  Development       Date:  2012-04       Impact factor: 6.868

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