Literature DB >> 10024663

Gas-liquid chromatography of the heptafluorobutyrate derivatives of the O-methyl-glycosides on capillary columns: a method for the quantitative determination of the monosaccharide composition of glycoproteins and glycolipids.

J P Zanetta1, P Timmerman, Y Leroy.   

Abstract

We have developed a method involving the formation of hepta-fluorobutyrate derivatives of O-methyl-glycosides liberated from glycoproteins and glycolipids following methanolysis. The stable derivatives of the most common monosaccharides of these glycoconjugates (Ara, Rha, Xyl, Fuc, Gal, Man, Glc, GlcNAc, GalNAc, Neu5Ac, KDN) can be separated and quantitatively and reproducibly determined with a high degree of sensitivity level (down to 25 pmol) in the presence of lysine as an internal standard. The GlcNAc residue bound to Asn in N-glycans is quantitatively recovered as two peaks. The latter were easily distinguished from the other GlcNAc residues of N-glycans, thus allowing a considerable improvement of the data on structure of N-glycans obtained from a single carbohydrate analysis. The most common contaminants present in buffers commonly used for the isolation of soluble or membrane-bound glycoproteins (SDS, Triton X-100, DOC, TRIS, glycine, and polyacrylamide or salts, as well as monosaccharide constituents of proteoglycans or degradation products of nucleic acids) do not interfere with these determinations. A carbohydrate analysis of glycoproteins isolated from a SDS/PAGE gel or from PDVF membranes can be performed on microgram amounts without significant interferences. Since fatty acid methyl esters and sphingosine derivatives are separated from the monosaccharide peaks, the complete composition of gangliosides can be achieved in a single step starting from less than 1 microg of the initial compound purified by preparative Silicagel TLC. Using electron impact ionization mass spectrometry, reporter ions for the different classes of O-methyl-glycosides (pentoses, deoxy-hexoses, hexoses, hexosamines, uronic acids, sialic acid, and KDN) allow the identification of these compounds in very complex mixtures. The mass of each compound can be determined in the chemical ionization mode and detection of positive or negative ions. This method presents a considerable improvement compared to those using TMS derivatives. Indeed the heptafluorobutyrate derivatives are stable, and acylation of amino groups is complete. Moreover, there is no interference with contaminants and the separation between fatty acid methyl-esters and O-methyl glycosides is achieved.

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Year:  1999        PMID: 10024663     DOI: 10.1093/glycob/9.3.255

Source DB:  PubMed          Journal:  Glycobiology        ISSN: 0959-6658            Impact factor:   4.313


  19 in total

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Authors:  P Hernández; H Debray; H Jaekel; Y Garfias; M del C Jiménez Md; S Martínez-Cairo; E Zenteno
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2.  Structure elucidation of NeuAc, NeuGc and Kdn-containing O-glycans released from Triturus alpestris oviductal mucins. Characterization of the poly LacdiNAc sequence: HSO3(4)(GalNAcbeta1-4GlcNAcbeta1-3)1-3GalNAcbeta1-4(GlcNAcbeta1-3)0-1GlcNAcbeta1-6GalNAc-ol.

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Review 3.  KDN (deaminated neuraminic acid): dreamful past and exciting future of the newest member of the sialic acid family.

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4.  The nematode Caenorhabditis elegans synthesizes unusual O-linked glycans: identification of glucose-substituted mucin-type O-glycans and short chondroitin-like oligosaccharides.

Authors:  Y Guérardel; L Balanzino; E Maes; Y Leroy; B Coddeville; R Oriol; G Strecker
Journal:  Biochem J       Date:  2001-07-01       Impact factor: 3.857

5.  Determination of constituents of sulphated proteoglycans using a methanolysis procedure and gas chromatography/mass spectrometry of heptafluorobutyrate derivatives.

Authors:  J P Zanetta; P Timmerman; Y Leroy
Journal:  Glycoconj J       Date:  1999-10       Impact factor: 2.916

6.  Secondary cell wall polysaccharides from Bacillus cereus strains G9241, 03BB87 and 03BB102 causing fatal pneumonia share similar glycosyl structures with the polysaccharides from Bacillus anthracis.

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Journal:  Glycobiology       Date:  2012-05-03       Impact factor: 4.313

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Authors:  M Wuhrer; S Rickhoff; R D Dennis; G Lochnit; P T Soboslay; S Baumeister; R Geyer
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Authors:  Carlos Solórzano; Stéphane Bouquelet; M Ali Pereyra; Francisco Blanco-Favela; Marie-Christine Slomianny; Raúl Chavez; Ricardo Lascurain; Edgar Zenteno; Concepción Agundis
Journal:  Glycoconj J       Date:  2006-11       Impact factor: 2.916

10.  Crystallization and identification of the glycosylated moieties of two isoforms of the main allergen Hev b 2 and preliminary X-ray analysis of two polymorphs of isoform II.

Authors:  D Fuentes-Silva; G Mendoza-Hernández; V Stojanoff; L A Palomares; E Zenteno; A Torres-Larios; A Rodríguez-Romero
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-08-31
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